miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|189275886|gb|FM025758.1|FM025758 GAGCAGTATTAGCTCTGTGGGCTCAGAACCATCACCTGCCCTTTCTGTGCTCTCATTGGATGCACTGGTCGCCCCGGACA
CACCCATCCAGTTTGACATCATTTCCCCCGTCAGCGAGGAAAACTCAGGACAGAGCAAGACGGCAGCACAGTCCGGCAGA
AGAAGTAATCCATTTGGAGAGTCAGGAGACAGCACATCAGAAGACAGTGAAGACTCGATCCTCCACCAGCTCTTTATCGT
TCGCTTCCTGGGCTCCATGGAGGTGAGGGCTGCCGAGTCAGCAGACGTCATCTCTGAGACCATGAGGCAGATCCTGGCGG
CCCGAGCCATCCACAACATCTTCAGGATGACCGAATCACACCTGCTGGTCACCTGTGACTGCCTCAAGCTCATTGATCCT
CAGACACAAGTCACTCGACTCAGGTTTCCTCTGTCCAGTGTGGTTCAATGTTCATCCCATCCGGACAACAAGAGGCTGTT
TGGTTTCGTTTTGCACTCGGCAAGCGAGCGGTGAGACAGCCGAGCCGTCTGCTACAT




Most similar to sp|Q9UKG1|DP13A_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9UKG1|DP13A_HUMAN DCC-interacting protein 13-alpha OS=Homo
           sapiens GN=APPL1 PE=1 SV=1
          Length = 709

 Score =  199 bits (507), Expect = 7e-51
 Identities = 104/155 (67%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
 Frame = +2

Query: 77  DTPIQFDIISPVSEENSGQSKTAAQSGRRSNPFXXXXXXXXXXXXXXILHQLFIVRFLGS 256
           DTPIQFDIISPV E+  GQ+K   Q GRR+NPF              ILHQLFIVRFLGS
Sbjct: 450 DTPIQFDIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLGS 509

Query: 257 MEVRAAESADVISETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLRFPLS 436
           MEV++ +  DV+ ETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRL FPL 
Sbjct: 510 MEVKSDDHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTFPLP 569

Query: 437 SVVQCSSHPDNKRLFGFVLHSASER*DSR--AVCY 535
            VV  ++H +NKRLFGFVL ++S R +S   +VCY
Sbjct: 570 CVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCY 604